PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu061427.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family LBD
Protein Properties Length: 203aa    MW: 22505.2 Da    PI: 7.0585
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu061427.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260127.46.8e-4071071100
       DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelall 97 
                  +C aCk+lrrkC+++Cv+apyf++eq + +fa++hk+FGasnv+kll++lp ++r++a+++++yeA+ar++dP yG+v++i++lqqq+ +l+a+la+l
  Oeu061427.1   7 PCGACKFLRRKCVRGCVFAPYFCHEQgATHFAAIHKVFGASNVSKLLAHLPVSDRREATTTIAYEAQARLQDPTYGCVSHIFALQQQVVNLQAQLASL 104
                  7*************************89********************************************************************99 PP

       DUF260  98 kee 100
                  ke+
  Oeu061427.1 105 KEQ 107
                  987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MTGSGSPCGA CKFLRRKCVR GCVFAPYFCH EQGATHFAAI HKVFGASNVS KLLAHLPVSD  60
RREATTTIAY EAQARLQDPT YGCVSHIFAL QQQVVNLQAQ LASLKEQAAQ CIPNSSNITA  120
NPRDGLSFLQ DVQNWYSQSF QNQGMMSQFD PNLNNTTGDM PCFENQNTNL NPFVKYENSD  180
FHKDNISFGS MDSFEMLSNN RQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42440.19e-58LBD family protein