PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu061516.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family SBP
Protein Properties Length: 229aa    MW: 25927.6 Da    PI: 7.5378
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu061516.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP76.93.2e-24172221150
                  --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEE CS
          SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfh 50 
                  +Cq+egC+adl++ak+yhrrhkvCe+hska++v+++gl+qrfCqqCsrf+
  Oeu061516.1 172 RCQAEGCHADLTHAKHYHRRHKVCEFHSKAATVIAAGLTQRFCQQCSRFY 221
                  6************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MVDYEWGNSS TIMLSGEEPA QDSNQNRQIF DPYATHNFTE ANTFVNPNDF ATPTPHNHHH  60
YHHQQPFHHP NTNTHLTNFY DPRSYGASGS SYSNPHAPQA SMLTLEPTGP TGFMMVPKSE  120
PVVGGFEFNT STSRIGLNLG GRTYFSSSED DFVNRLYRRS RLIEHGSVNS PRCQAEGCHA  180
DLTHAKHYHR RHKVCEFHSK AATVIAAGLT QRFCQQCSRF YIHPRIFF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G02065.22e-58SBP family protein