PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu061529.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

HD-ZIP

Protein Properties

Length: 253aa MW: 28424.4 Da PI: 8.8417

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu061529.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59	7.9e-19	110	164	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tk q Lee F+++++++ ++++eLA +l+L rqV vWFqNrRa+ k Oeu061529.1 110 RKKLRLTKVQSALLEESFKQHSTLNPKQKQELAGELHLRPRQVEVWFQNRRARTK 164 678899***********************************************98 PP
2	HD-ZIP_I/II	120.9	6.6e-39	110	199	1	90
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 +kk+rl+k q++lLEesF+++++L+p++K+ela eL+l+prqv+vWFqnrRARtk+kq+E+d+e+Lk++y +l+een+rL+ke +eL+++ Oeu061529.1 110 RKKLRLTKVQSALLEESFKQHSTLNPKQKQELAGELHLRPRQVEVWFQNRRARTKLKQTEVDCEYLKKCYGSLTEENRRLQKELQELKAQ 199 69*************************************************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 253 aa Download sequence
MGFSEICNTG LVLGLGLSST NEPKSEKPIL KLSEPSLALS LSGDLRYDRT VKKVVNISDQ 60 TDKLYRQDST VTSLSNLSVK RDRELGNEEG DIERVCSRFI DEDDEGSNGR KKLRLTKVQS 120 ALLEESFKQH STLNPKQKQE LAGELHLRPR QVEVWFQNRR ARTKLKQTEV DCEYLKKCYG 180 SLTEENRRLQ KELQELKAQK LAQPFYMAAT LSMCPSCERI GGDGGKVPAK SPFLITPKPH 240 FYSPFANPPA TC*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	159	167	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37790.1	6e-78	HD-ZIP family protein