PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu061644.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 224aa    MW: 25689.2 Da    PI: 9.8883
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu061644.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.74.6e-172774148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT++Ed++lvd +++ G gtW+  +++ g+ R++k+c++rw +yl
      Oeu061644.1 27 KGAWTPQEDKILVDFITKNGHGTWRDLPKHTGLLRCGKSCRLRWANYL 74
                     79******************************99************97 PP
2Myb_DNA-binding38.13.6e-1280125148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg+ ++eE+  ++++  +lG++ W++Ia++++ gR ++++k+ w+++l
      Oeu061644.1  80 RGPLSPEEENTIIHLQGMLGNK-WAAIASHLP-GRKDNDIKNLWHSHL 125
                      7999******************.*********.***********9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MGNKREKEEG EKKKWRKPCC EKERVRKGAW TPQEDKILVD FITKNGHGTW RDLPKHTGLL  60
RCGKSCRLRW ANYLRPDIKR GPLSPEEENT IIHLQGMLGN KWAAIASHLP GRKDNDIKNL  120
WHSHLKKHFS SKCSHPPASS EMVMKLDSPS EWENVRVEAK SSFSANALLL NNQSSVYKSD  180
QGDYFIRLRN SELGKSFQNI KENVEPINCK TRAEDMTTAY SDL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11118EKKKWRKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61250.16e-67MYB family protein