PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu061798.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 409aa    MW: 46604.2 Da    PI: 7.4504
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu061798.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS422.92.6e-129394071373
         GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn..sseelaalklfsevsPilkfshl 96 
                  +++lL++cAe +s +dl++a++lL+ ls+++sp+gd+++Rl++ ft+AL+ rl+r v    + l p++++++   ++ + +++ l ++v+P+++fshl
  Oeu061798.1  39 MRQLLISCAELISRSDLSAAHRLLSILSTNSSPYGDSTERLVHQFTKALSLRLNRYVAAADSFLIPNPSATNLvnETLVQSSYLLVNQVTPFIRFSHL 136
                  589****************************************************9999988887777776662244445566669************ PP

         GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvl.vakrledle.le 192
                  taNqaIlea+eg++++Hi+Dfdi++G+QWp+L+qa+a+R  +pp+lRiTg gs    + e l++tg+rLakfA++lg++f+f++l + ++ ++++  +
  Oeu061798.1 137 TANQAILEATEGQQAIHILDFDIMHGVQWPPLMQAMAER-FPPPTLRITGTGS----DLEVLRRTGDRLAKFAHSLGLRFQFQPLiILNNEDSISvAS 229
                  **************************************9.799**********....***************************95444555555156 PP

         GRAS 193 eLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErell 290
                  ++ + p+E+laVn+v+ lhrl++++  l+     +L+ +ks++Pkv++v+e+ea+hn++ Fl+rf+eal++y+a+fdslea+lp++s+er +vE+ ++
  Oeu061798.1 230 AILLLPDETLAVNCVHYLHRLFKDRDRLRL----FLHRIKSMNPKVFTVAEREANHNHPIFLQRFVEALDHYAAVFDSLEATLPPTSHERLTVEQIWF 323
                  789999****************66666666....**************************************************************** PP

         GRAS 291 greivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaW 373
                  grei ++va+ g++r+erhe++++W+ +l+++ F++vpls +a +qaklllr ++ s+gy+++  ++s +lgW+++pL+svS+W
  Oeu061798.1 324 GREIADIVAADGERRKERHERFRSWKVMLRSSDFNNVPLSPFALSQAKLLLRIHYpSEGYQLHILNDSCFLGWQNQPLFSVSSW 407
                  ************************************************************************************ PP
Sequence ? help Back to Top
Protein Sequence    Length: 409 aa     Download sequence    
MLGSFGSSSH EEEPLPPNVH YHDNHHIQRR SFTPPAIHMR QLLISCAELI SRSDLSAAHR  60
LLSILSTNSS PYGDSTERLV HQFTKALSLR LNRYVAAADS FLIPNPSATN LVNETLVQSS  120
YLLVNQVTPF IRFSHLTANQ AILEATEGQQ AIHILDFDIM HGVQWPPLMQ AMAERFPPPT  180
LRITGTGSDL EVLRRTGDRL AKFAHSLGLR FQFQPLIILN NEDSISVASA ILLLPDETLA  240
VNCVHYLHRL FKDRDRLRLF LHRIKSMNPK VFTVAEREAN HNHPIFLQRF VEALDHYAAV  300
FDSLEATLPP TSHERLTVEQ IWFGREIADI VAADGERRKE RHERFRSWKV MLRSSDFNNV  360
PLSPFALSQA KLLLRIHYPS EGYQLHILND SCFLGWQNQP LFSVSSWH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G55580.11e-129GRAS family protein