PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu061813.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

HD-ZIP

Protein Properties

Length: 269aa MW: 30186.9 Da PI: 8.4576

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu061813.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.2	1.4e-18	122	176	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tk q Lee F+++++++ +++++LA+ l+L rqV vWFqNrRa+ k Oeu061813.1 122 RKKLRLTKAQSALLEESFKQHSTLNPKQKQDLARDLKLRPRQVEVWFQNRRARTK 176 678899***********************************************98 PP
2	HD-ZIP_I/II	118.6	3.4e-38	122	211	1	90
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 +kk+rl+k q++lLEesF+++++L+p++K++lar+L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lk+ +++l+e+n+rL+ke +eL+++ Oeu061813.1 122 RKKLRLTKAQSALLEESFKQHSTLNPKQKQDLARDLKLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKYCETLTEQNKRLQKELQELKAQ 211 69*************************************************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 269 aa Download sequence
MVVDDLCNTS LVLGLSNFSS TVERTSSKKL SSQKYDGKNC EPSLTLSLSG ETYDQIQTVK 60 KVDSDIKVSN DPSADFYRQD SAASSFSNGS VKREREVGSE EVEIEKVVSR VSDEDEDGSN 120 GRKKLRLTKA QSALLEESFK QHSTLNPKQK QDLARDLKLR PRQVEVWFQN RRARTKLKQT 180 EVDCEFLKKY CETLTEQNKR LQKELQELKA QKLSQPLYMQ LPAATLTMCP SCERIGGPAV 240 GENKSNSPFT IAPKPHFYNP YTNQSAAC*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	171	179	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37790.1	3e-85	HD-ZIP family protein