PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu061820.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 471aa MW: 53748.4 Da PI: 9.1704

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu061820.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	32.2	1.9e-10	98	143	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h +Er+RR+++ + f L l+P + k+ +K+++L A++Y+k+Lq Oeu061820.1 98 HILAERKRREHLSQQFVALSALVPGL-----KRRDKISVLGDAIKYLKHLQ 143 8889********************.....89***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 471 aa Download sequence
MEKNEVAIEQ PSKQKETNNY NFCRPNPDPF PSSSTPIILN FGSVNSFESP QPLNLSTMNS 60 EEKAAVSEVL RKPVEVTKIE PTIKKTSRVR PPSQTYDHIL AERKRREHLS QQFVALSALV 120 PGLKRRDKIS VLGDAIKYLK HLQQRMQAIE EQSTKQNLES VVLVKRSRLL MEDDGLSYES 180 NSSSEQQLPE IEARVCNNDI HLRIHSKKHK GVLSKVLCEV EKLNLTIVNI NVTPFGSFAL 240 DIIIIAEEER KSMEEKLEKR VHAGLSDIFK HLQFPPTRGV HEVHMVDVFI MSDHAKALSR 300 HQVDDVERVL AIYRRRVLTM QTSFVKASRL LTAKLKALEK EKDKEVGDLK KSLDVVEAHK 360 KEMEFRINEQ EREIDNLRSF LARAQIDIAD RYKTSSEYAK DMNDYGAKIM AASIALTKEW 420 VTVEHPSIDP SDYDCFLLQR RDKEKVTKQT KIFGHTNTPR RGSGGSSNPE *

Sequence ? help Back to Top

Protein Sequence Length: 471 aa Download sequence

MEKNEVAIEQ PSKQKETNNY NFCRPNPDPF PSSSTPIILN FGSVNSFESP QPLNLSTMNS  60
EEKAAVSEVL RKPVEVTKIE PTIKKTSRVR PPSQTYDHIL AERKRREHLS QQFVALSALV  120
PGLKRRDKIS VLGDAIKYLK HLQQRMQAIE EQSTKQNLES VVLVKRSRLL MEDDGLSYES  180
NSSSEQQLPE IEARVCNNDI HLRIHSKKHK GVLSKVLCEV EKLNLTIVNI NVTPFGSFAL  240
DIIIIAEEER KSMEEKLEKR VHAGLSDIFK HLQFPPTRGV HEVHMVDVFI MSDHAKALSR  300
HQVDDVERVL AIYRRRVLTM QTSFVKASRL LTAKLKALEK EKDKEVGDLK KSLDVVEAHK  360
KEMEFRINEQ EREIDNLRSF LARAQIDIAD RYKTSSEYAK DMNDYGAKIM AASIALTKEW  420
VTVEHPSIDP SDYDCFLLQR RDKEKVTKQT KIFGHTNTPR RGSGGSSNPE *

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	102	107	ERKRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	9e-46	bHLH family protein