PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu061909.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 707aa MW: 75974.9 Da PI: 6.4023

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu061909.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	49.5	7.6e-16	448	494	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+ellP++ K +Ka++L +A+eY+k Lq Oeu061909.1 448 VHNLSERRRRDRINEKMRALQELLPNC-----NKADKASMLDEAIEYLKTLQ 494 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 707 aa Download sequence
MPLSEFLRMA RGNLVSGDLN KCQNDVASRV ENELVELVWE NGQILMHGQS SRGTKDSSIH 60 NLQSHLPRVQ DAGIGNSSTS RIGKFSGVES ILNDISPMVP LGELDVSQDD EIVPWLNYPI 120 DDGMPQEYCS ELLPEISGVT ANGMSAQSSF ETNKRSSFDQ SENILHNDGN ASKVSSSRAH 180 LSGPWLSQQG QTSDPSLGSG VSDIISNNTN NIPDAIIGNS ARGQAIGNDD SVKMERRNVE 240 IPSSGSNLLN FSHFSRPAAL IRANFPNTDG MPISGSSGVK MMETNEKCSA ANNGNPVKST 300 LIKRLNSTEK DIDFHFPSTN VCNKLNSRPL ASKPPKEAVP AEQTEGLHRE TFVKFHKSLI 360 RSDAPNASNG VPDSEKTVEP VVASSSVGSG NYADRASCDQ MHNCKRKFHD IEESDCHSDD 420 IETESINFKK ATSARGGTGS KRSRAAEVHN LSERRRRDRI NEKMRALQEL LPNCNKADKA 480 SMLDEAIEYL KTLQLQVQIM SMGAGLCMSP MMFPTGMQHI HPAHMPHFSP MGVGMGMGFG 540 MGMLDMNGGT PRYPIFPVPP IQGSHFSSPM PGSSNFPRTA GSNSQVFGHP SHGLPGSVPL 600 APLVPLPGRP LSSAVGLNTS VAGGRMNVPC ISVTTNSEDP VRNKNSQLMH SAEASSTMNH 660 TSNQLQPTNE VLHKPGEVQE NKLGPNVSMS TDATNATVIS TNDGCD*

Sequence ? help Back to Top

Protein Sequence Length: 707 aa Download sequence

MPLSEFLRMA RGNLVSGDLN KCQNDVASRV ENELVELVWE NGQILMHGQS SRGTKDSSIH  60
NLQSHLPRVQ DAGIGNSSTS RIGKFSGVES ILNDISPMVP LGELDVSQDD EIVPWLNYPI  120
DDGMPQEYCS ELLPEISGVT ANGMSAQSSF ETNKRSSFDQ SENILHNDGN ASKVSSSRAH  180
LSGPWLSQQG QTSDPSLGSG VSDIISNNTN NIPDAIIGNS ARGQAIGNDD SVKMERRNVE  240
IPSSGSNLLN FSHFSRPAAL IRANFPNTDG MPISGSSGVK MMETNEKCSA ANNGNPVKST  300
LIKRLNSTEK DIDFHFPSTN VCNKLNSRPL ASKPPKEAVP AEQTEGLHRE TFVKFHKSLI  360
RSDAPNASNG VPDSEKTVEP VVASSSVGSG NYADRASCDQ MHNCKRKFHD IEESDCHSDD  420
IETESINFKK ATSARGGTGS KRSRAAEVHN LSERRRRDRI NEKMRALQEL LPNCNKADKA  480
SMLDEAIEYL KTLQLQVQIM SMGAGLCMSP MMFPTGMQHI HPAHMPHFSP MGVGMGMGFG  540
MGMLDMNGGT PRYPIFPVPP IQGSHFSSPM PGSSNFPRTA GSNSQVFGHP SHGLPGSVPL  600
APLVPLPGRP LSSAVGLNTS VAGGRMNVPC ISVTTNSEDP VRNKNSQLMH SAEASSTMNH  660
TSNQLQPTNE VLHKPGEVQE NKLGPNVSMS TDATNATVIS TNDGCD*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	453	458	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	2e-57	bHLH family protein