PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu062007.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

TCP

Protein Properties

Length: 228aa MW: 23622 Da PI: 10.6443

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu062007.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	75	2.2e-23	1	60	24	74
TCP 24 lsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.........e 74 ++ +caar+F+L++eLG+++d++ti WLl+qa+p+i+++tgt++ +a ++ + Oeu062007.1 1 MPPTCAARVFQLTRELGHKSDGETIRWLLEQAEPSIIAATGTGTVPAIAMsvngilkipT 60 899***************************************777773332222222111 PP

Sequence ? help Back to Top
Protein Sequence Length: 228 aa Download sequence
MPPTCAARVF QLTRELGHKS DGETIRWLLE QAEPSIIAAT GTGTVPAIAM SVNGILKIPT 60 TGSTATDGGG QTNRKRKRPD NSEFVEINTV SNKISNSNMN LTTTNPAIIS TNSSMSAPLM 120 STVPTPARAL VPLITMWAIP AAPPNANASP TFLIIPQAVQ NGPPLVTISA SARPISAGFA 180 TVQPGGANIA QPQLDKSAVQ VNLQSLPSSS AASCTSVVEK SRQRLRC*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45680.1	1e-43	TCP family protein