PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu062321.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family ARF
Protein Properties Length: 787aa    MW: 85891.1 Da    PI: 6.2307
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu062321.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B375.56.1e-24144245199
                  EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
           B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                  f+k+lt sd++++g +++p++ ae++      +++ + s++l+ +d++g  W++++iyr++++r++lt+GW+ Fv+ ++L +gD v+F ++   ++el
  Oeu062321.1 144 FCKTLTASDTSSHGGFSVPRRAAEDCfpsldyEQQ-RPSQELVAKDLHGTLWKFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRV--ADGEL 238
                  99****************************97433.45679************************************************43..78899 PP

                  EEEEE-S CS
           B3  93 vvkvfrk 99 
                  +++++r+
  Oeu062321.1 239 RLGIRRA 245
                  9999986 PP
2Auxin_resp118.26.7e-39270351182
   Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 
                  +aha+st+ vF+++YnPras+se +v+++k++k+l +++s+GmRfkm+fe ed+ err+sG+v+gvsdldpvrWp+SkWr+L
  Oeu062321.1 270 VAHAISTRRVFNICYNPRASSSEIIVPYHKFLKSLAHSFSAGMRFKMHFEAEDATERRCSGLVIGVSDLDPVRWPGSKWRCL 351
                  79*******************************************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 787 aa     Download sequence    
MVFGLIDLNT VNTDDETSSF DSPSSSSGNL ELPASAVCME LWHACAGPLI SLPRKGSAVV  60
YFPQGHLERI SDHTALASDL PPHVFCRVVD VKLHAEEAND EVYAQVSLVP DNEIEQKWKE  120
GEIEAEGEEE DTVGAEKSIT PHMFCKTLTA SDTSSHGGFS VPRRAAEDCF PSLDYEQQRP  180
SQELVAKDLH GTLWKFRHIY RGQPRRHLLT TGWSAFVNKK KLVSGDAVLF LRVADGELRL  240
GIRRAAQVKI GTAFPAPYCQ QFTSSSMASV AHAISTRRVF NICYNPRASS SEIIVPYHKF  300
LKSLAHSFSA GMRFKMHFEA EDATERRCSG LVIGVSDLDP VRWPGSKWRC LVVRWDDMEG  360
NRHTRVSPWE IEPSGSASGP SSFLVPGTKR TRGSLPTTKP DFPIPRDGNE PSDFGEPSRF  420
QVLQGQEIFC FSTPHGGQSQ SQCLSKMRCF PGFRTSMISG VASNIRHLQE DSGTPSAGTG  480
FVESSRFCKV LQGQETSSSL PYGRGPAANQ FQENSGSVRL PNYGSHWSAQ GQGYTQMRHS  540
AQLVQESSPS SVLLFQQPNS PPCNLQALHL HQKKRETSSR DSVDFERYAR EPFQSGSALE  600
DVLRNGSSGQ SEEYNQIESS YPRGSQNLVS MCKKGCMLFG FSLIDGKHGA SKEDNLTEST  660
TSYNHGTKFL ACNEEQVHPS PPVPIKMMDG FAVNSTIGSS VSSIVPFVIE LYIDTNSDTA  720
TSIFDADADA DDTTHGRGPP VLASPHHGAP NEPMVTGAVV VVLILVVATA VVLCGGGGDD  780
DKQWLC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33860.11e-180ARF family protein