PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu062488.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family NAC
Protein Properties Length: 171aa    MW: 19853.1 Da    PI: 5.0557
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu062488.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM89.94.6e-28111431128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevd...iykvePwdLpkkvkaeekewyfFskrdkkya.tgkrknratk..sgyWkatgkdkev 92 
                  lp G+rF P+deel+ +yL++kv + +l+  +vik+vd   +y+ +P++L   v+++e++wyfF++++  +  +gk++ r++    g+W+   ++  +
  Oeu062488.1  11 LPSGYRFVPNDEELMEFYLTRKVCNGPLPH-DVIKDVDaseLYSKHPKTLVDDVYNHENSWYFFTHTNDDNVeEGKKTIRIVGdgIGFWRGLLSEDLI 107
                  699************************999.8888886555999******98999999******988766652699999987734678********** PP

          NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                  ++++g +   k+   +++g   kg++t+W+m+eyrl
  Oeu062488.1 108 YNSNGDVCAFKTHWRYFEGPIIKGKRTNWTMEEYRL 143
                  **********************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MASQYGHIMD LPSGYRFVPN DEELMEFYLT RKVCNGPLPH DVIKDVDASE LYSKHPKTLV  60
DDVYNHENSW YFFTHTNDDN VEEGKKTIRI VGDGIGFWRG LLSEDLIYNS NGDVCAFKTH  120
WRYFEGPIIK GKRTNWTMEE YRLRNDAPTS SNDEEQLVCA SLYNKVIYNH *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62380.15e-23NAC family protein