PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu062525.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

TCP

Protein Properties

Length: 262aa MW: 27518.9 Da PI: 9.9147

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu062525.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	123.9	1.7e-38	20	106	2	88
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg 88 a+k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqqa+ +i+++tg+++++as+ a+ s s++ +s++ Oeu062525.1 20 APKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAESSIIAATGSGTIPASALAAAGVSISQQGNSIS 106 789******************************************************************888555555555555554 PP

Sequence ? help Back to Top
Protein Sequence Length: 262 aa Download sequence
MKDFQIVVAE KEEGKKQALA PKRSSNKDRH TKVEGRGRRI RMPALCAARI FQLTRELGHK 60 SDGETIQWLL QQAESSIIAA TGSGTIPASA LAAAGVSISQ QGNSISAGIH QKIDEFGGHM 120 GGPGGGGNRT SWPMVNLGRP HMASAGIWPP AVSGFGFQSS SGPPTVNLGS EGSNYLQKIG 180 FPGFDLSSSN IGPMSFTSIM GASTNQQLPG LELGLSQDGH IGVLNPQAMS QLYQQMGQSR 240 MHPQQQQQQA SPKDDSQGSG Q*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	2e-70	TCP family protein