PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu062798.2

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 711aa MW: 76304.2 Da PI: 6.3499

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu062798.2	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	50	5.4e-16	449	495	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K +Ka++L +A+eY+k Lq Oeu062798.2 449 VHNLSERRRRDRINEKMRALQELIPNC-----NKADKASMLDEAIEYLKTLQ 495 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 711 aa Download sequence
MPLSEFLRMA RGNLDSGEQD KRQNGLPSRD ENELVELVWE NGQIVMQGHS SRGNKGLSVH 60 NLQSHVPRVR DSGIGNFTTS RIGKFGGVES ILNDISPMVP SGELDVSQDD EMVPWLNYPI 120 DDGLPQDHCS ELLPEISGVT ANGMSAQSIF ATNKRSTFDQ SESNLHDNGN ASKVSSSRAR 180 LSCPWLPQQG QTPDPSLGSG VSDIISTNMS DIPDAIFGNS ARGQASGNDS NSEKMERRNV 240 EIPSSSSNLL NFSHFSRPAA LIKANFPNTD GMPISGSSGI KGMEANEKGS ATNSSNPVKS 300 TLFKRLNSKE KDIDIHFPST MACNELDSRP PVSKPPKESK HAEQEEGLPQ ETLVKKPKSS 360 IPSNAPNASN GVLDSERTVE PVIASSSVGS GNSANRASSD QIQNCKRKYH ENEESDCHSD 420 DIETESINVK KETSARGGTG SKRSRAAEVH NLSERRRRDR INEKMRALQE LIPNCNKADK 480 ASMLDEAIEY LKTLQLQVQI MSMGAGFCMP PMMFPTGMQH VHPAHMPHFS PMGVGMGMGF 540 GMGMLDMNVG TPGYPIFPVP PMQGSHFSSP MPGCTNFPRI AGSNRPVFGH PSHGLPGFVP 600 QAPLVPLPGR PPVGSAMGLN TSMSGGHMNV PSTSLTTNSD DPIRNKNSQL MQTAEASSSM 660 NYTPNKLQAA NDVLHQPAKV QENKLGLDVS VSADATPTNA TDISTKGGCD *

Sequence ? help Back to Top

Protein Sequence Length: 711 aa Download sequence

MPLSEFLRMA RGNLDSGEQD KRQNGLPSRD ENELVELVWE NGQIVMQGHS SRGNKGLSVH  60
NLQSHVPRVR DSGIGNFTTS RIGKFGGVES ILNDISPMVP SGELDVSQDD EMVPWLNYPI  120
DDGLPQDHCS ELLPEISGVT ANGMSAQSIF ATNKRSTFDQ SESNLHDNGN ASKVSSSRAR  180
LSCPWLPQQG QTPDPSLGSG VSDIISTNMS DIPDAIFGNS ARGQASGNDS NSEKMERRNV  240
EIPSSSSNLL NFSHFSRPAA LIKANFPNTD GMPISGSSGI KGMEANEKGS ATNSSNPVKS  300
TLFKRLNSKE KDIDIHFPST MACNELDSRP PVSKPPKESK HAEQEEGLPQ ETLVKKPKSS  360
IPSNAPNASN GVLDSERTVE PVIASSSVGS GNSANRASSD QIQNCKRKYH ENEESDCHSD  420
DIETESINVK KETSARGGTG SKRSRAAEVH NLSERRRRDR INEKMRALQE LIPNCNKADK  480
ASMLDEAIEY LKTLQLQVQI MSMGAGFCMP PMMFPTGMQH VHPAHMPHFS PMGVGMGMGF  540
GMGMLDMNVG TPGYPIFPVP PMQGSHFSSP MPGCTNFPRI AGSNRPVFGH PSHGLPGFVP  600
QAPLVPLPGR PPVGSAMGLN TSMSGGHMNV PSTSLTTNSD DPIRNKNSQL MQTAEASSSM  660
NYTPNKLQAA NDVLHQPAKV QENKLGLDVS VSADATPTNA TDISTKGGCD *

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	454	459	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	5e-48	bHLH family protein