PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu062913.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

HD-ZIP

Protein Properties

Length: 267aa MW: 30031.1 Da PI: 4.2174

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu062913.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	65.3	8.4e-21	49	102	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t+eq++ Le+ Fe ++++ +++++LAkklgL+ rqV vWFqNrRa++k Oeu062913.1 49 KKRRLTPEQVHLLEKSFETENKLEPDRKTQLAKKLGLQPRQVAVWFQNRRARWK 102 5678*************************************************9 PP
2	HD-ZIP_I/II	134.2	4.5e-43	48	138	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 ekkrrl+ eqv+lLE+sFe+e+kLep+rK++la++LglqprqvavWFqnrRAR+ktkqlE+dy++Lk++yd+l+++ +++ k++e+L++e+ Oeu062913.1 48 EKKRRLTPEQVHLLEKSFETENKLEPDRKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDQLKSSYDSLASNYDSILKDNEKLKAEV 138 69**************************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 267 aa Download sequence
MLFIGNGESV YRGARSAMNM EETSKRRPFF SSPEDLYDEE YYDEQLPEKK RRLTPEQVHL 60 LEKSFETENK LEPDRKTQLA KKLGLQPRQV AVWFQNRRAR WKTKQLERDY DQLKSSYDSL 120 ASNYDSILKD NEKLKAEVLS LTEMLQGKET AGEKENPLPV DAPADTTPVQ LIVKVEDRLS 180 SGSDGSSVVD DQEGPQLVDS GDSYFPNNYY MGCVAAGVVE GIQSEEEDGS DDGGSYFSNV 240 LLAAEGQQLE GEGEPLGWYI WSTLDN*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	97	105	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	3e-79	HD-ZIP family protein