PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu062942.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MIKC_MADS
Protein Properties Length: 237aa    MW: 26982.3 Da    PI: 10.1726
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu062942.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF84.37.4e-27959151
                 S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
       SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                 k+ien+s rqvtf+kRr g+lKKA+EL vLCdaev vi+fs tgklye++s
  Oeu062942.1  9 KKIENTSSRQVTFTKRRGGLLKKAKELAVLCDAEVGVIVFSGTGKLYEFAS 59
                 68***********************************************86 PP
2K-box50.59.1e-188417212100
        K-box  12 akaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                  a++ + + +++ Lk+e+e+L+  +R++lG++L+ Lsl+eLq +e++L ++   +++ K++ l+e++e+++ + +++ ++n+aLr+++ee
  Oeu062942.1  84 ANQVEVHADVNALKDELEKLKLMHRRMLGKELGGLSLQELQDMEHKLSEGAMLVKNEKEKKLFEKLEKSKLQRQKVVQQNEALREQVEE 172
                  456778999*****************************************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MGRVKVEIKK IENTSSRQVT FTKRRGGLLK KAKELAVLCD AEVGVIVFSG TGKLYEFASF  60
GMEHIIERYK SLRPFEVAQL ENVANQVEVH ADVNALKDEL EKLKLMHRRM LGKELGGLSL  120
QELQDMEHKL SEGAMLVKNE KEKKLFEKLE KSKLQRQKVV QQNEALREQV EELKHQVGLS  180
RSHRLLGRKD YGTALTSVRE GSSDISLRLE LSLVDRPEKR KLPKTESSFK IPMDTN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13790.12e-41MIKC_MADS family protein