PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu063117.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

Trihelix

Protein Properties

Length: 285aa MW: 31764.5 Da PI: 8.1277

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu063117.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	43.2	1.1e-13	10	77	4	71
trihelix 4 kqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr 71 ++e +++i+ e ++ +rgk + +W++v +++++ g+ rs++qC++kw+nl +++kk++e +++ Oeu063117.1 10 DDERRLMIRHGGESSSAHERGKPGELRWKRVEDYCWKNGIFRSQNQCNDKWDNLMRDFKKVREYQRRV 77 4555666777778888888999*****************************************99986 PP

Sequence ? help Back to Top
Protein Sequence Length: 285 aa Download sequence
MVLIEAKKMD DERRLMIRHG GESSSAHERG KPGELRWKRV EDYCWKNGIF RSQNQCNDKW 60 DNLMRDFKKV REYQRRVVAE RGGGEERSYW KMERNERKEH GLPSNMLPQI FDALVEVVER 120 KDVVGGGIGT SNVNPIQAIV AQTMPLPLPP PAQPPTHPFA EPSLPTADSD TSGHSDSPAK 180 RRRRREGEGE GGEGGAAAGG SSLQEVCSAI SQSGSIIAEA IHSREEREER RHREVLSSHE 240 RRLQIEESNA QINRQGINGL VDAINKLANS IIALASHKNQ PDSK*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	180	185	KRRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	2e-45	Trihelix family protein