PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu063175.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 153aa MW: 16386.8 Da PI: 10.7266

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu063175.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.9	0.00016	7	29	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC CgksF++ L H +H Oeu063175.1 7 HKCDVCGKSFPSCQALGGHKTSH 29 79***********9999998877 PP
2	zf-C2H2	19.9	2e-06	96	118	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC CgksF+++ L H +H Oeu063175.1 96 HKCDMCGKSFPSWQALSGHRTSH 118 79*****************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 153 aa Download sequence
MGQKQSHKCD VCGKSFPSCQ ALGGHKTSHR SRPPPTTPPP PPPPKTSSSR MYLISNQEFN 60 PPAAAIITTP TTIKAIEYKK GIEPSSTTPL GQKQSHKCDM CGKSFPSWQA LSGHRTSHRS 120 RPQPTTPPPP PPPKTPSSRM YLISNQVVAA AL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49930.1	1e-10	C2H2 family protein