PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu063201.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GATA
Protein Properties Length: 200aa    MW: 21911.8 Da    PI: 7.3065
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu063201.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA641.7e-2085119135
         GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                  C+nC tt+TplWR+gp+g+k+LCnaCG++++k+++
  Oeu063201.1  85 CANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER 119
                  ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MMFSNGFDEG GDTDMYSFTS SSSSSVDCTL SLGTPSTRVS DEKEKRRSNF GWNMAAPASS  60
ANRNHRGGSN SNTNPGGDPL LARRCANCDT TSTPLWRNGP RGPKSLCNAC GIRFKKEERR  120
ATAATAGATN NGGAEHRVLD SSWINYNSQT QNMPCFTSSY SNEFRFIEDD DRDSDTGTPF  180
LSWRFNVTDR PSLVHDFTR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50870.18e-47GATA family protein