PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu063208.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

SBP

Protein Properties

Length: 341aa MW: 38151.8 Da PI: 8.6929

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu063208.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	129.1	1.7e-40	125	202	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegC+ l +ak+yhrrhkvCe+h+kap+v+v+g+eqrfCqqCsrfh++sefDe+krsCrrrLa+hn rrrk+ + Oeu063208.1 125 RCQVEGCQLVLVNAKDYHRRHKVCEMHAKAPKVVVHGIEQRFCQQCSRFHAVSEFDESKRSCRRRLAGHNLRRRKNPQ 202 6**************************************************************************865 PP

Sequence ? help Back to Top
Protein Sequence Length: 341 aa Download sequence
MENNWNLFGN NSNANVRGRN DSCHAWEIWD PANTFRHPTS TSSSTMQVEA HDFHALMLNH 60 HDNPSSLSQS HFYPDPHLTC LKLGKKHHFE DVTPGTSMTK KGKPYGTTGG GGGASSAAAP 120 PILPRCQVEG CQLVLVNAKD YHRRHKVCEM HAKAPKVVVH GIEQRFCQQC SRFHAVSEFD 180 ESKRSCRRRL AGHNLRRRKN PQDHSEVARR TYQGIKEMAG RYQYSPTNGE CALSLLSSEN 240 NSWIPYKDLP SRCSTALHDL IAENRAAILA RQLNLQQMKT ADPTQKGSLR ILNNQIIPGS 300 QEYGIDLTLD LMQATPSSEF GLLSMHDKSG EESWKVHLGY *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27370.3	3e-30	SBP family protein