PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu063400.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family Trihelix
Protein Properties Length: 235aa    MW: 28025 Da    PI: 9.4875
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu063400.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix68.11.8e-212721386
     trihelix 13 arremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
                 +r +++ ++ ++k++k lWe +s +mre+g++rs++qCk+kw+nl +r+k ++++e +     ++++p++++l+
  Oeu063400.1  2 IRADLDPTFMETKRNKLLWEVISTRMREKGYNRSAEQCKCKWKNLVTRFKGCETMEAES---MRQQFPFYNELQ 72
                 78999****************************************************84...45689*****98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MIRADLDPTF METKRNKLLW EVISTRMREK GYNRSAEQCK CKWKNLVTRF KGCETMEAES  60
MRQQFPFYNE LQAIFGARMQ RMLWIEAEGG GASSSKKKAA ATAQLSSDED EDNEESDGDQ  120
KGGIKKKRKI KNNTNPSNSS NLITSIREIM DEFMKQQMQM EMQWLKAFEA REEERRIKEM  180
EWRRTMEALE NERIMMERRW REREEQRRLR EEARAEKRDA LITALLNKLR REDM*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1120129QKGGIKKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38250.12e-43Trihelix family protein