PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu063414.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 285aa MW: 32425.6 Da PI: 9.2786

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu063414.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.2	3.3e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+ Ed++l d++k +G g+W+t +++ g++R++k+c++rw++yl Oeu063414.1 14 RGAWTAAEDKILRDYIKFHGEGRWRTLPKRAGLKRCGKSCRLRWLNYL 61 89********************************************97 PP
2	Myb_DNA-binding	49.5	9.7e-16	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ T +E+e +++++k+lG++ W++Ia +++ gRt++++k++w++ Oeu063414.1 67 RGNITWDEEEVIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNTN 111 7899****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 285 aa Download sequence
MGRNPCCTKV GLNRGAWTAA EDKILRDYIK FHGEGRWRTL PKRAGLKRCG KSCRLRWLNY 60 LRPDIKRGNI TWDEEEVIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNT NLRRRVHQND 120 PKSASICDNL LENPNSKGKM KIGLKNESPP VVRTKATRCS KSFIDQQDIQ NEFNKKTDNS 180 SSLVVKDSAD FSRTQPGSHN EFKQNLSSFR PDACFDDDLL NLSNVLNSEL WGVQELSDGN 240 KKVNNGLLSP SSGGPFYDEM LEDWIDPHIL TQIPDFGGDW LANV*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G35550.1	7e-63	MYB family protein