PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu063533.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family M-type_MADS
Protein Properties Length: 101aa    MW: 11328 Da    PI: 5.7228
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu063533.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF31.62.2e-102221030
                 HHHHHHHHHHHHHHHHHHHHH CS
       SRF-TF 10 qvtfskRrngilKKAeELSvL 30
                 ++tf+kRr+g++KKA+ L+vL
  Oeu063533.1  2 YTTFTKRRQGLFKKAKALCVL 22
                 69******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 101 aa     Download sequence    
MYTTFTKRRQ GLFKKAKALC VLIFSKAGNA LFFFCHPNVE SVLNRYFTYS SSSLTKDEDE  60
VVVPPIVLLE IDELEVAIQE IKHKVVARSG EIISNGEDQD *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.12e-11M-type_MADS family protein