PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu063546.2
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GATA
Protein Properties Length: 318aa    MW: 34603.9 Da    PI: 8.4685
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu063546.2genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA46.84.2e-15256291134
         GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkg 34 
                  C++Cg ++  Tp++Rrgp g++tLCnaCGl+++ kg
  Oeu063546.2 256 CRHCGISSkaTPMMRRGPHGPRTLCNACGLKWANKG 291
                  *****9999***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MQTRGAKIDL YAKREICDKD RQYRQGFMYG PQTTMNSGNT VQHPGTTYVD EEEDDDVRCS  60
NGKSIDNPPS QIRYEGPNSS HSPHALQTAG GGGVMDAVDT VALYEAGSTD MTSAVAPASV  120
EGGPDQLTLS FQGEVYVFDS VSPEKVQAVL LLLGGYEVPT GIPSAGMTPQ NQRGLGEYPG  180
RLNQPQRAAS LNRFREKRKE RCFDKKIRYT VRKEVALRMQ RKKGQFTSSK SLCDELGPSS  240
ADWSGSSGQE GQETLCRHCG ISSKATPMMR RGPHGPRTLC NACGLKWANK GILRDLTKVP  300
VGAQHHTPKA SELVCNF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.25e-87GATA family protein