PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu063616.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family FAR1
Protein Properties Length: 239aa    MW: 26457.9 Da    PI: 8.0126
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu063616.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR121.76.5e-0751114168
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkv 68 
                  +fY++YA+ vGF vrk++skk  ++g     ++v     k++++k + +k rr++a + t+ kak + 
  Oeu063616.1  51 DFYKRYAYAVGFPVRKRNSKKG-DDGV---VRYVNVLDPKTSNRKGAPRKLRRKSALESTSKKAKATS 114
                  6****************99887.5553...34444444444444444444555555555555555444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MEDGNEDPLL LCNDEIVGDN INSMDRELLG EDKEVAPDVG MIFDGEKELF DFYKRYAYAV  60
GFPVRKRNSK KGDDGVVRYV NVLDPKTSNR KGAPRKLRRK SALESTSKKA KATSTKSKGK  120
RPAVGRTDME EVASDLQLSG QLHHSQPTPF SYSQLLLPSV CPTVIVIHFY PTSSTNVIFN  180
SQGEHVLMPC HMLGTSAPCF AQLHGGTHFP RRSHIANDIA RIRPLVSNHN DDEISYGN*