PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu063870.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

HD-ZIP

Protein Properties

Length: 282aa MW: 31868.2 Da PI: 8.6706

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu063870.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56.6	4.3e-18	158	212	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq Lee F+++++++ +++ LAk+l+L rqV vWFqNrRa+ k Oeu063870.1 158 RKKLRLTKEQSAFLEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTK 212 788899***********************************************98 PP
2	HD-ZIP_I/II	128.2	3.3e-41	158	247	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rl+keq+++LEesF+e+++L+p++K +la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+ke +eLr +l Oeu063870.1 158 RKKLRLTKEQSAFLEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCEKLTEENRRLQKEIQELR-AL 247 69*************************************************************************************9.55 PP

Sequence ? help Back to Top
Protein Sequence Length: 282 aa Download sequence
MELNLSLGDI PKGFTFLGKS REIDGEEDLG FCMALGMKGE DEISKKETSE RKRSSSDLPL 60 QLDLLPFSPV PRSQTSSSLR FPWLTQNLAN ERGKGLERTL GVEEAENGAA QSSPNSTVSS 120 FRMDFSIYTR GKRDAKECEA DGGASSRASD EEENGMARKK LRLTKEQSAF LEESFKEHNT 180 LNPKQKLALA KQLNLRPRQV EVWFQNRRAR TKLKQTEVDC EYLKRCCEKL TEENRRLQKE 240 IQELRALKAS QPFYMQQPAT TLTMCPSCER VATAKPKLVS F*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	207	215	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06710.1	3e-75	HD-ZIP family protein