PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu063943.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 348aa    MW: 38401.7 Da    PI: 7.5305
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu063943.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.40.00062132511255
                  HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  R +++ +++ +L +l+ +      +K + a++L +++ YI+ Lq
  Oeu063943.1 213 RKEKLGDRITTLHQLVSPF-----GKTDTASVLSETIGYIRFLQ 251
                  6678889999999999998.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    
MAGNPNWWRI NGMHQQYSQQ QISSSHLSTA SSEYLYGSSS LSSNSSSDHH PNQDFPVRSW  60
SQLLLVGWGD LILGVGPGSW LGASMGGFTG DEDRFDTILL QRKKLENWED QILNSSSFRV  120
PAREVKQERG HIYSQVDDEF QACKSSWPQV IPVSSPNSYI TSLSNSILNF SNAKGNRKTP  180
DQYSTECNST ITGGISKKPR VQQLSTQPAL KVRKEKLGDR ITTLHQLVSP FGKTDTASVL  240
SETIGYIRFL QAQIEALYSP YMRNGSGNTG RQLSVQERNC LFPDEPVQFF NEIGCEGREA  300
SKQGKQSQVN DLRSRGLCLV PVSFTQHVGH DINGGSDCWT PALGGGF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29100.11e-53bHLH family protein