PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu064558.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 197aa    MW: 22390.8 Da    PI: 8.038
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu064558.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.49.6e-12750755
                 HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                   Er+RR+++N+++  Lr ++P+      +K++Ka+i + A++YI +L+
  Oeu064558.1  7 VSERNRRKKLNERLYALRAVVPNI-----TKMDKASIIKDAIQYIEKLE 50
                 57*********************7.....7***************9995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MTSKNIVSER NRRKKLNERL YALRAVVPNI TKMDKASIIK DAIQYIEKLE EEKKRIQLEI  60
SELESGASRN SIIFDFDQEA TTYCSNPKRT RLDHGNDSNT SRSYPIEVLE LRVSHMGEKT  120
AVISLTCSKR TYTIVKLCEI FESLKLKIIT ANITAFSQSL LKTVFVEVDE EEKELLRLKI  180
EGAIAALNDP DSPMSF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.11e-58bHLH family protein