PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu064696.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

LBD

Protein Properties

Length: 178aa MW: 19991.9 Da PI: 5.641

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu064696.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	128	4.4e-40	10	106	1	97
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelall 97 +CaaCk+lrr+C+kdC++ pyfp ++p+kfa+vh++FGasn++k+l+++p ++r da+ slvyeA r+++PvyG++g+i++lq q+ ql++el+++ Oeu064696.1 10 PCAACKLLRRRCTKDCIFLPYFPPSEPQKFAAVHRVFGASNISKMLQEIPVHDRGDAAMSLVYEATTRLKEPVYGCAGFISSLQMQILQLQSELNEA 106 7********************************************************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 178 aa Download sequence
MESYSKNIMP CAACKLLRRR CTKDCIFLPY FPPSEPQKFA AVHRVFGASN ISKMLQEIPV 60 HDRGDAAMSL VYEATTRLKE PVYGCAGFIS SLQMQILQLQ SELNEALAET VTLKTQLANA 120 LSIIISSQEG YQLNHITEKN NYNLIDYQQL RECNINENAS CTRLLDLPVT DSDLEHM*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G31320.1	9e-44	LBD family protein