PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu064836.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family LBD
Protein Properties Length: 185aa    MW: 21159.1 Da    PI: 9.017
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu064836.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260104.59.1e-339106198
       DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                  aCa+Ck++r+kC+++C+lap fp +++++f+ vhk+FG+s+v+k++ +l+ee+r++a++sl++eA +r++dPv G +g ++++ ++l+  +++  +++
  Oeu064836.1   9 ACASCKHQRKKCTEKCILAPFFPVDKTREFQGVHKVFGVSKVTKIVMNLEEEDRKRAVDSLIWEAFCRQKDPVLGPYGEYRRVCEELRLYQSQYLQIQ 106
                  7**************************************************************************************99998765544 PP
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    
MQKANGTSAC ASCKHQRKKC TEKCILAPFF PVDKTREFQG VHKVFGVSKV TKIVMNLEEE  60
DRKRAVDSLI WEAFCRQKDP VLGPYGEYRR VCEELRLYQS QYLQIQQVQN QFKAAAQGLM  120
GWNSNKFMSY NSAEINNNNV DNNSSLNIQE THKLRGERDN SSALIMPPLH LPNGFNQQYF  180
FTGI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06280.15e-46LBD family protein