PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP000115.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 592aa    MW: 66676.2 Da    PI: 6.2454
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP000115.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM53.39.3e-1791471128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpk.....kvka....eekewyfFskrdkkyatgkrknratk..sgyWka 85 
                  + pG+rF P +eel+ +yL +k++g  ++  ++ +  +++y   eP+   +     +  a    ++k++yf ++  +k ++g+r +r+++   g+Wk 
  PCP000115.1   9 MLPGYRFCPLEEELILHYLLPKANGMVVPGIDHvVFYFNLYGDqEPSAVWEnfktrR--AndlrRNKDLYFITELTTKVPRGSRISRTVAkgVGTWKG 104
                  579************************777665367779996449*99964244431..1445456689******************66623577*** PP

          NAM  86 tgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                    k k+++    +++++g +k + +   ++ +g+  +W+m ++ l
  PCP000115.1 105 DDKGKKICYPagTNNVIGYRKRFHYE--NKGSGKDDRWIMLQFDL 147
                  *******999777788*****99886..788999********987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 592 aa     Download sequence    
MEHVYDDRML PGYRFCPLEE ELILHYLLPK ANGMVVPGID HVVFYFNLYG DQEPSAVWEN  60
FKTRRANDLR RNKDLYFITE LTTKVPRGSR ISRTVAKGVG TWKGDDKGKK ICYPAGTNNV  120
IGYRKRFHYE NKGSGKDDRW IMLQFDLHQS LIHNQQEKKY VLCILRKNEE FDKKRKQLAE  180
EDAEMVGEDV DNKSARSLKT HGKRQRLLPC VPELQYLQPR INMISSPPLA TGLVHAREEN  240
QGQELLVTCF NNVPSFADNE PSALQWEEAW CQQQQKFQPC IDNNNIVPAA VTLPDDFDQY  300
VGDTRYTATT QADRHYPYVS ETGFTSTTQA HDHPYVDASG FRVNTQAYDI HQYVDSTGLA  360
ASTQADHLHS YINGMGFSVS TQAHDLQQYV SSARFAATTQ VDHLHSHVDG AGFDVTTQAH  420
DLHQHVDGTT FAATTQADHL YPYVDDTGFT ATTTQADHLH PPSNNVLGGL GDLISDNFQS  480
DYMGEGIVGS VDALESVQLL CYEPLYFLLY LGLVGQLSLQ LPPVLTCWSM LLFGIFYLSV  540
LRLLCMRFIL CCSPSHLAGA ASGTRAGLFM YSSLGIMRLP TPLPHRMISL LA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71930.13e-15NAC family protein