PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP000169.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 91aa    MW: 10345.8 Da    PI: 9.3331
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP000169.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.73.2e-0621571854
                 HHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
          HLH 18 safeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                 +  ++Lr+l+P+ +   +s K   + +L++++ YI++L
  PCP000169.1 21 ELVSKLRQLVPEiR-DRRSNKAPASKVLQETCSYIRNL 57
                 56689*******66.7888889999***********99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 91 aa     Download sequence    
MSSRRSRQSG TPAIKDDQII ELVSKLRQLV PEIRDRRSNK APASKVLQET CSYIRNLHRE  60
VDDLSERLSQ LLSTIDADSP EAAIIRSLIM Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28857.13e-40bHLH family protein