PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP000422.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 204aa    MW: 23113.5 Da    PI: 8.6829
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP000422.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding22.13.6e-071256344
                     SS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrw 44
                      W++eE+ +l d+ ++++++    + ++Ia  ++ ++t  ++ +r 
      PCP000422.1 12 DWSAEEQAILEDGLTKYPTEsnvsRYAKIAMQLQ-NKTVRDVALRC 56
                     7*********************************.*****999885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MAMKHNPGIS MDWSAEEQAI LEDGLTKYPT ESNVSRYAKI AMQLQNKTVR DVALRCRWMT  60
KKEISKRRKE EHNLTRKSKD KKERVNDTSA KPSHFAARPN VAPYAPPMIT MDNDDGIPYK  120
AIGGITGELL EQNAQALNQI SANLAAFQIQ ENVNLFCQTR DNILKIMNDL NDMPDVMKQM  180
PPLPVKMNEE LATHVGIPPH QMQS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17683RKSKDKKE