PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP000510.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB

Protein Properties

Length: 225aa MW: 25328.1 Da PI: 7.6965

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP000510.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	45.2	2.1e-14	9	56	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT eEd +l d++ +G+g W+++ + g++R++k+c++rw +yl PCP000510.1 9 KGLWTVEEDRILTDYIGVHGKGKWNRVNKVTGLKRSGKSCRLRWMNYL 56 678*******************************************97 PP
2	Myb_DNA-binding	54.4	2.8e-17	62	107	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 r +++eEd+l+++++++ G++ W++Ia +++ gRt++q+k++w+++l PCP000510.1 62 RSDFSEEEDDLIIRVHNLVGNR-WSLIAGRVP-GRTDNQVKNHWNSHL 107 6789****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence
MDGGNDYKKG LWTVEEDRIL TDYIGVHGKG KWNRVNKVTG LKRSGKSCRL RWMNYLSPSV 60 KRSDFSEEED DLIIRVHNLV GNRWSLIAGR VPGRTDNQVK NHWNSHLSKK LGVNSKRGKT 120 KAKTYSDSKR AKNNFCTPSS ESNSELQPLP NSDSNSNISG DHEAAAAIDG FDEEMMNIQD 180 HIGSKSEVGF SGMSEATMMS NDYSFWFHND DLNPYEPLFI GPYSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14750.1	2e-65	MYB family protein