PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP000568.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 196aa    MW: 22066.1 Da    PI: 4.92
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP000568.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.21.5e-133678754
                 HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
          HLH  7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                   Er+RR+++N++++ Lr ++P+ +      K++Ka+i + A+eYI++L
  PCP000568.1 36 VSERNRRKKLNERLFALRAVVPNiS------KMDKASIIKDAIEYIQEL 78
                 57*********************66......****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MIVVRSSWGL DEAFSGYYDS SSPDGAASSM ASKNIVSERN RRKKLNERLF ALRAVVPNIS  60
KMDKASIIKD AIEYIQELHE QEKRIQTEIV ELESGKSNKN PGSDFEQDLP VLLRSKKKKI  120
DQIYDSEGSR TSTIEILELR VTYMGEKTVV VSLTCSKRTD TMVKLCEADE EEKDDLKIKI  180
ETAIAALNDP ESPMSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.33e-69bHLH family protein