PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP000629.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 322aa    MW: 35373.4 Da    PI: 4.462
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP000629.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.45.9e-09137179855
                  HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                   Er+RR  +++++  Lr+l+P+      +K++Ka+i+   v Y+++Lq
  PCP000629.1 137 SERKRRGSMKERLYALRSLVPNI-----TKMDKASIVGDSVLYVQDLQ 179
                  6*********************7.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MDSLGNQHQG GHNINDFELQ DFIDDANFDQ FIDIIRGDGE DPAANFDPDL MMNGCFDDYS  60
LFGQAGSTTP PGLMFGFNDV IVPDPTTSLF ATSPNFDGEM KGREEEYYND GEDSSGTTTT  120
MTTTKRQKVD RSRTLVSERK RRGSMKERLY ALRSLVPNIT KMDKASIVGD SVLYVQDLQQ  180
QAKKLKAEIA SLEASLAGAD DREGHLEGST KPNKDSNNDQ FVSKGILQID VSQVEEKGFY  240
VKVACNKGGG VAISLYKALE SLTSFDVQSS NLNTVSADRF EITFALNVKK CEQDVVNLPN  300
LKLWVTGAFL NQGFKLASGF SA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.17e-90bHLH family protein