PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP000736.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bHLH

Protein Properties

Length: 545aa MW: 58976 Da PI: 5.8937

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP000736.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.3	9.9e-12	360	402	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A+eY+k+L PCP000736.1 360 MAERRRRQKLNDRLYMLRSVVPKiS------KMDRASILGDAIEYLKEL 402 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 545 aa Download sequence
MLPRLNGGVW MDDREDRETV SWTRTSAAAI AGTTENKDEM GSLSTFKSML EAEDDWYMAT 60 NNSIHGHSDV RDISFSPSFA DPESLLLNPV DSSSSCSPSS SVFNNLDPNQ VHYYMPQNPN 120 LSSLLNVVPN NPLDPGFDLG CDIGFLDTQA STGGSSLMNR GGGVLTGFND LSSNSQMNAQ 180 NLGSNLQFST TRMPQLLENS SNFSGFRGLD DGLANALFPN RPKLLRPLES FPSVGAQPTL 240 FQKRAALRKN LADGGGNLGV LGSQGGLVLN EGNERKREMG VENEKKRKMR GGDDVDDLSF 300 DGSGLNYDSD EFTENTKVDD GAKNGGNSSN ANSTVTAAGG GGGGGGHKGK KKGLPAKNLM 360 AERRRRQKLN DRLYMLRSVV PKISKMDRAS ILGDAIEYLK ELLQRINNLH NELESIPSGS 420 ALTPTGNTFH PLTPTPATLP NRIKEELCPS SLPSPNGQPA RVEVRQREGR AVNIHMFCGR 480 RPGLLLSTMR TLDNLGLDIQ QAVISCFNGF AMDVFRAEQC KEGQDVHPDQ IKAVLLDLIG 540 FHGMV

Sequence ? help Back to Top

Protein Sequence Length: 545 aa Download sequence

MLPRLNGGVW MDDREDRETV SWTRTSAAAI AGTTENKDEM GSLSTFKSML EAEDDWYMAT  60
NNSIHGHSDV RDISFSPSFA DPESLLLNPV DSSSSCSPSS SVFNNLDPNQ VHYYMPQNPN  120
LSSLLNVVPN NPLDPGFDLG CDIGFLDTQA STGGSSLMNR GGGVLTGFND LSSNSQMNAQ  180
NLGSNLQFST TRMPQLLENS SNFSGFRGLD DGLANALFPN RPKLLRPLES FPSVGAQPTL  240
FQKRAALRKN LADGGGNLGV LGSQGGLVLN EGNERKREMG VENEKKRKMR GGDDVDDLSF  300
DGSGLNYDSD EFTENTKVDD GAKNGGNSSN ANSTVTAAGG GGGGGGHKGK KKGLPAKNLM  360
AERRRRQKLN DRLYMLRSVV PKISKMDRAS ILGDAIEYLK ELLQRINNLH NELESIPSGS  420
ALTPTGNTFH PLTPTPATLP NRIKEELCPS SLPSPNGQPA RVEVRQREGR AVNIHMFCGR  480
RPGLLLSTMR TLDNLGLDIQ QAVISCFNGF AMDVFRAEQC KEGQDVHPDQ IKAVLLDLIG  540
FHGMV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	350	366	KKKGLPAKNLMAERRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	1e-125	bHLH family protein