PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP000746.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

ERF

Protein Properties

Length: 844aa MW: 93637.2 Da PI: 6.0876

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP000746.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	60.3	4.5e-19	649	698	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp+ + +r++lg+f tae Aa a+++a+++++g PCP000746.1 649 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFETAEAAALAYDEAALRFKG 698 7******.******94....45*********************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 844 aa Download sequence
MGNCFSNDAG AMSAVGGTAA SHANPYDAPN DAVDLFLRSR GYNGLFSQIE ISLAAVDLRD 60 RDVLSKSDPM VVIYTKGRDG GLSELGRTEV VLNSLNPKWI TKQNITYHFE VVQTLVFRVY 120 DIDTQFHNSE VKMLKLEEHQ FLGEATCVLS EIISKSDRLL TLNLEYREEL GRPNPHRDCG 180 KLIVHAEESF SSKTAIEMSL RCSDLEYKDL FSKSDPFLVI SKVAESGITI PICKTEVIKN 240 DLKPLWKPVY LNIQQVGSKD SPLIMECFNF NNNGKHDLIG KVQKSLADLE KLHDSRQGEH 300 LFLPTAVGHD FHNKVLKSQL FVDKFTETVQ HTFLDYLAGG CELNFMVAVD FTASNGNPRL 360 PDSLHYIDPT GRPNAYQRAI IDVVEVLQFY DSDKRFPAWG FGARPIDGPV SHCFNLNGSS 420 HHCEVEGIQG IMMAYASALQ NVSLAGPTLF GPVITNAAFN ASQSLANGGR KYFVLLIITD 480 GVVTDLQETK DALVKASDLP LSILIVGVGG ADFKEMEILD ADKGERLESS TGRVASRDIV 540 QFVPFRDVQS HKVDRKHGKR SFPGDESEKK EEDHQMIFDP FCSSARSQHE MSAMVSALAQ 600 VLGSNNSQTP AVQEPAEPPL ITPQSSAMEL HDGQSPQQAQ DQGNVRRRHY RGVRQRPWGK 660 WAAEIRDPKK AARVWLGTFE TAEAAALAYD EAALRFKGSK AKLNFPERVQ GRITELGYLT 720 TTSTQQNLPA GASQSITDHH QPLPDHQYQL QAFPNNVATP HDQYAPYFLS GNECVNYDDL 780 PTTLSEREGF AFQTSETTSS SLLPFLPSHQ QEDQQHPLSY SMPAFGSSSS SSSNPPPRNR 840 NRRP

Sequence ? help Back to Top

Protein Sequence Length: 844 aa Download sequence

MGNCFSNDAG AMSAVGGTAA SHANPYDAPN DAVDLFLRSR GYNGLFSQIE ISLAAVDLRD  60
RDVLSKSDPM VVIYTKGRDG GLSELGRTEV VLNSLNPKWI TKQNITYHFE VVQTLVFRVY  120
DIDTQFHNSE VKMLKLEEHQ FLGEATCVLS EIISKSDRLL TLNLEYREEL GRPNPHRDCG  180
KLIVHAEESF SSKTAIEMSL RCSDLEYKDL FSKSDPFLVI SKVAESGITI PICKTEVIKN  240
DLKPLWKPVY LNIQQVGSKD SPLIMECFNF NNNGKHDLIG KVQKSLADLE KLHDSRQGEH  300
LFLPTAVGHD FHNKVLKSQL FVDKFTETVQ HTFLDYLAGG CELNFMVAVD FTASNGNPRL  360
PDSLHYIDPT GRPNAYQRAI IDVVEVLQFY DSDKRFPAWG FGARPIDGPV SHCFNLNGSS  420
HHCEVEGIQG IMMAYASALQ NVSLAGPTLF GPVITNAAFN ASQSLANGGR KYFVLLIITD  480
GVVTDLQETK DALVKASDLP LSILIVGVGG ADFKEMEILD ADKGERLESS TGRVASRDIV  540
QFVPFRDVQS HKVDRKHGKR SFPGDESEKK EEDHQMIFDP FCSSARSQHE MSAMVSALAQ  600
VLGSNNSQTP AVQEPAEPPL ITPQSSAMEL HDGQSPQQAQ DQGNVRRRHY RGVRQRPWGK  660
WAAEIRDPKK AARVWLGTFE TAEAAALAYD EAALRFKGSK AKLNFPERVQ GRITELGYLT  720
TTSTQQNLPA GASQSITDHH QPLPDHQYQL QAFPNNVATP HDQYAPYFLS GNECVNYDDL  780
PTTLSEREGF AFQTSETTSS SLLPFLPSHQ QEDQQHPLSY SMPAFGSSSS SSSNPPPRNR  840
NRRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G07310.1	7e-34	ERF family protein