PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP001133.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 256aa    MW: 30119.7 Da    PI: 11.0425
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP001133.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM47.84.7e-15702019128
          NAM   9 PtdeelvveyLkkkvegkk...leleevikevdiy.kvePwdLpk...kvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevlsk... 95 
                  P d+el++++L +kv  ++    +   +++e+d++ +++Pw++       +   k+ yfF+k +k +++g +  r  +++g+W+ +  +++v+++   
  PCP001133.1  70 PADQELINFFLYRKVVLRQplvPRHVGFVHEIDLLgDHQPWEIWDacgGPQPYGKQAYFFCKLKKLSKSGVHIDRrNASEGFWNGKQLSEDVFVHhdv 167
                  9*************88888675333356****9762689****74233223356799********99999887776999*****99999999997556 PP

          NAM  96 ...kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     ++  +g k+ + + ++   + ++ dW ++ y l
  PCP001133.1 168 npnNKWIIGRKRQFKYVNEG--SEHHHDWYLETYIL 201
                  5544445*********9443..34589*****9976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MRFCLGKGID IPPVVALQSR SIRLVRLSNK TKKKITRTRS RRNGKAIPAQ PGAWGTKYFP  60
VSFFSQLQAP ADQELINFFL YRKVVLRQPL VPRHVGFVHE IDLLGDHQPW EIWDACGGPQ  120
PYGKQAYFFC KLKKLSKSGV HIDRRNASEG FWNGKQLSED VFVHHDVNPN NKWIIGRKRQ  180
FKYVNEGSEH HHDWYLETYI LASIPDDDQA VVAICRLRKN YHKRKRYVPQ RNRRRINGRK  240
ERHGRRINGQ LMETKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12910.17e-09NAC family protein