PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP001186.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 350aa    MW: 38577.4 Da    PI: 6.8978
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP001186.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.58.5e-12174220455
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                   h  +Er+RR+++ ++f  L  llP +     kK++Ka++L  A++Y+++Lq
  PCP001186.1 174 DHVLAERKRREKLSQRFIALSALLPGL-----KKMDKASVLGDAIKYVNHLQ 220
                  58899**********************.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MEDPTFINQY EMNSLDYSFD ELVFSSLSSE SYSSNPNFTS KAAAATHNFS KAFIENPHQT  60
GTQERPAKQP KNTTSWKSCS ADHIIAAKAS SSSSSHLISF ENSDSSPPTT SQQYYGLDCT  120
VIKPKNEVEY SNGKVNLSAL VSQGSYDTQT CSPNHGQGIK RAATVTRSPL YAQDHVLAER  180
KRREKLSQRF IALSALLPGL KKMDKASVLG DAIKYVNHLQ ERTKVLEDQA AKKTGEAVVF  240
VKRMQYSADD DISSSDENSE SCSDQPLPEI EARVSDKEVL IRIHCEKTKG CLTSILSEIE  300
KLGLTIVHSC ALPFGNSTLD ITVVAQMDVE FSMTGKHLVK NLRHALLKLV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1179184ERKRRE
2180185RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22760.15e-57bHLH family protein