PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP001234.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 277aa    MW: 31226.8 Da    PI: 7.0862
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP001234.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.93.3e-20135184255
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                   y+GVr+++ +g+W+AeIrdp+    r +r++lg+f tae+Aa+a+++a+ +++g
  PCP001234.1 135 NYRGVRQRP-WGKWAAEIRDPR----RaTRVWLGTFTTAEDAARAYDKAAIEFRG 184
                  59*******.**********82....48************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MQYPYKRLKL SDTQPDDPAT LEFQSPPPPH RLTQDQEYAV MVSTLRNVVA GTATSATMDL  60
NSLLPSHATC SPGYNTSTNC YSNTLLPPSD LDTCHVCKIK GCLGCILFPP PPAAHSQDEK  120
GGNYKKGPKK RAKKNYRGVR QRPWGKWAAE IRDPRRATRV WLGTFTTAED AARAYDKAAI  180
EFRGPRAKLN FQFPDTTLLD QESNSTQPQH QQQQQQQQQV VTEQGNKNVE FSREVETTAI  240
LKENEFWEKI GEEEFQWMTM LDFATDNSSD SGNAHSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.11e-35ERF family protein