PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP001237.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 102aa    MW: 11478.8 Da    PI: 9.4367
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP001237.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.51.5e-081459346
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
                     +WT+   + + +a + + ++   +W  +a+ +g g+t++++k ++  
      PCP001237.1 14 SWTAKQNKAFEKALAVYDKDtadRWYNVAKAVG-GKTPEEVKRHYEV 59
                     7********************************.**********975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 102 aa     Download sequence    
MASSSMSSRG SGSSWTAKQN KAFEKALAVY DKDTADRWYN VAKAVGGKTP EEVKRHYEVL  60
VEDVKHIESG QVPFPDYRTT GGNSHGHHMS DEEKRMRNLK LH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.15e-44MYB_related family protein