PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP001244.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

CAMTA

Protein Properties

Length: 532aa MW: 58517.8 Da PI: 4.6421

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP001244.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	46.4	7.6e-15	62	101	35	75
CG-1 35 ksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKv 75 gs++++++k+ ++fr+DGy+wkk kdg+t +E hekLK PCP001244.1 62 FGGSIFVFDKKVQKHFRNDGYKWKKAKDGRT-KEGHEKLKY 101 579*************************7.9****96 PP

Sequence ? help Back to Top
Protein Sequence Length: 532 aa Download sequence
MANRFIADQL TDEFMVTDIR FLAHRLTDEF MVTDEFMDTR FLADRLTDEF MAESNRDIAD 60 QFGGSIFVFD KKVQKHFRND GYKWKKAKDG RTKEGHEKLK YSWKNFGIKL IWSNVAWLKV 120 VIHCTATMLM GKNIKNFNDA VTGCLMKHSF ADDFSWEALF DEHYTAGDSL WTHSRASSSV 180 AVEPSPLGKR QREEGKSQAT HNATMEEVDK EKDEDEEEEG NDINQVRKRP KVTCGQKSNS 240 VAPSNDSEEA TLAVGTAHPQ VQQLNFAIQK GEVIAGNNPA ASDVAVTIDR TITDGAMNDA 300 TALSQAQPPV PQPIAIIGVD IAAATNKTAA PESSDPDSVQ TRPTSNANQD FVQDVESQEK 360 ETKPTSFEPK NGKGKIMVQR VVGTEKFAYD FQFQIQDSPS ILQAQEDDAT TRLVAFSITD 420 PSGAASLARG PIHLNPDTIA NVVDQAQDSR PTVTTGIVIS ATINETSASE SSNHALVQWE 480 PTSNANQDFT QDVVESQEKG TEPTSIEPEN GKSKAVVQRD FGTVTGKSLT LA

Sequence ? help Back to Top

Protein Sequence Length: 532 aa Download sequence

MANRFIADQL TDEFMVTDIR FLAHRLTDEF MVTDEFMDTR FLADRLTDEF MAESNRDIAD  60
QFGGSIFVFD KKVQKHFRND GYKWKKAKDG RTKEGHEKLK YSWKNFGIKL IWSNVAWLKV  120
VIHCTATMLM GKNIKNFNDA VTGCLMKHSF ADDFSWEALF DEHYTAGDSL WTHSRASSSV  180
AVEPSPLGKR QREEGKSQAT HNATMEEVDK EKDEDEEEEG NDINQVRKRP KVTCGQKSNS  240
VAPSNDSEEA TLAVGTAHPQ VQQLNFAIQK GEVIAGNNPA ASDVAVTIDR TITDGAMNDA  300
TALSQAQPPV PQPIAIIGVD IAAATNKTAA PESSDPDSVQ TRPTSNANQD FVQDVESQEK  360
ETKPTSFEPK NGKGKIMVQR VVGTEKFAYD FQFQIQDSPS ILQAQEDDAT TRLVAFSITD  420
PSGAASLARG PIHLNPDTIA NVVDQAQDSR PTVTTGIVIS ATINETSASE SSNHALVQWE  480
PTSNANQDFT QDVVESQEKG TEPTSIEPEN GKSKAVVQRD FGTVTGKSLT LA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	5e-10	CAMTA family protein