PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP001276.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 243aa    MW: 27685.6 Da    PI: 5.0034
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP001276.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.52.5e-135597754
                 HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
          HLH  7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                   Er+RR+++N++++ Lr ++P+ +      K++Ka+i + A++YI++L
  PCP001276.1 55 VSERNRRKKLNERLFALRAVVPNiS------KMDKASIIKDAIDYIQEL 97
                 57*********************66......****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MDNIGDEYKN YWETNMFLQT EELDSSWGLD EAFSGYYDSS SPDGAASFMA SKNIVSERNR  60
RKKLNERLFA LRAVVPNISK MDKASIIKDA IDYIQELHEQ ERRIQTEIVE LESGKSNKKL  120
GSDFEQDLPV LLRSKKKKIE HLYDCGESRI STIEILELRV TYMGEKTLVV SLTCSKRTDT  180
MVKLCEVFES LKLKIITANI TAFSGRVSKT VIVEADEEEK DHLKIKIETA IAALNDPQSP  240
MSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.11e-100bHLH family protein