PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP001501.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 188aa    MW: 20624.2 Da    PI: 9.161
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP001501.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.82.5e-10100143755
                  HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                  ++ ++RR+ri +++  L+el+P+ +      K++ +++LekA+ Y+k Lq
  PCP001501.1 100 IAAKNRRERISERLKILQELVPNgC------KVDLVTMLEKAISYVKFLQ 143
                  5679*******************77......******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
MAGIGDPSLS GDFSCLQTAS NYSSSIPNTS KEDHGDHEAY GWLHSEVSDS FQEPDKQKAG  60
FHKRPITGES MQPSKKQCTG ATKKPKPKSS TSPSKDPQSI AAKNRRERIS ERLKILQELV  120
PNGCKVDLVT MLEKAISYVK FLQLQVKVLA TDDFWPVQGR KAPDISQVKE AIDAILSSSQ  180
RDTSSSSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66470.18e-54bHLH family protein