PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP001523.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 251aa    MW: 27937.1 Da    PI: 10.4996
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP001523.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.21.4e-08162202954
                  HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                   r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  PCP001523.1 162 ARHRRERISEKIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 202
                  699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MDMMTMMMQM QKQQHSPDQF CSDSYPNNNN NPTFPEMDLN WVSNPNPNNH ESISPVPIFH  60
NPNAVPPQPA LLNPALPSSV SFIGNPIQEP LTPRLSKPSG ISPTGLSVLP STSYEKRNSM  120
AAMREMIFRI AAMQPIQIDP EAVKPPKRRN VKISKDPQSV AARHRRERIS EKIRILQRLV  180
PGGTKMDTAS MLDEAIHYVK FLKKQVQTLE RAGADRPVGL GFQGSGSQLG NVNYSGFLRP  240
SQLVGSVQML R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67060.17e-49bHLH family protein