PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP001600.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bHLH

Protein Properties

Length: 164aa MW: 18434.5 Da PI: 4.5149

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP001600.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	14.3	7.7e-05	121	144	8	30
HHHHHHHHHHHHHHHHHCTSCC.C CS HLH 8 rErrRRdriNsafeeLrellPk.a 30 Er+RR ri+++ Lr+l+P+ PCP001600.1 121 SERKRRGRIKERHYALRSLVPNiT 144 6********************955 PP

Sequence ? help Back to Top
Protein Sequence Length: 164 aa Download sequence
MWESSIDDGN FDQFIDRIRG GEGEDPMANF DCVLMINGCL DDYNLFGPAS TTPPGPMFGF 60 NDAFLPDPST FVLTTLPNFD EEMKDEEDYN DGEDSSGTTN TNTTTTTTKR QKVDRSRTLV 120 SERKRRGRIK ERHYALRSLV PNITKGSVGR SKLYTAVQLL LSNM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28160.1	2e-26	bHLH family protein