PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP001654.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family C2H2
Protein Properties Length: 152aa    MW: 17505.7 Da    PI: 7.9335
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP001654.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.26.3e-056991123
                 EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                 + C +Cgk+F  + + ++H +++
  PCP001654.1 69 FGCRKCGKPFAVRGDWRTHEKNC 91
                 56*****************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 152 aa     Download sequence    
MHMWGHGSQY RKGPESLRGT KPASSVLRLP CYCCAEGCKN SIEHPRSRPL KDFRTLQTHY  60
KRKHGTKPFG CRKCGKPFAV RGDWRTHEKN CGKLWFCICG SDFKHKRSLK DHVRGFGDGH  120
APYAVELCTE PEEEDHMDDE DDDNNEDDLV IN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13290.13e-80C2H2 family protein