PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP001668.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 77aa    MW: 8654.98 Da    PI: 4.9271
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP001668.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM44.45.4e-142976148
          NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp 48
                 lp+Gf F+Pt eel+ +yL+ k++g++  +++vi+e++i+++eP dLp
  PCP001668.1 29 LPVGFGFRPTGEELIGYYLQMKLKGTDYVFSDVIPEINICDHEPMDLP 76
                 79****************************9****************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 77 aa     Download sequence    
MAANGIHFTR VGDKVFPVGF HWTRVGDVLP VGFGFRPTGE ELIGYYLQMK LKGTDYVFSD  60
VIPEINICDH EPMDLPV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33060.12e-14NAC family protein