PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP001675.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 147aa    MW: 15709.7 Da    PI: 8.4984
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP001675.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.15.7e-07112139434
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...T CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskap 34 
                  +h   Er RR+++++ f++L  llP++   p
  PCP001675.1 112 MHILTERERRKKMRNMFANLHALLPQL---P 139
                  79999********************96...3 PP
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    
MAEGEAGGFT EGLLWENQSW ANLYFISDNS GGGGDEEKNL GKEQETAVME ISAEGHNQEK  60
TVPPPPPAAG KKRKGGGGGV GKNVKAKGKG STRTGDKGKC VAGGNESDDH EMHILTERER  120
RKKMRNMFAN LHALLPQLPA KVIQLTI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17199KKRKGGGGGVGKNVKAKGKGSTRTGDKGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.17e-16bHLH family protein