PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP001787.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 333aa    MW: 36695.4 Da    PI: 6.5187
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP001787.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH50.14.9e-164493255
                 HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                 r +h+  E+rRR++iN++f+ Lr+l+P++    ++K + a+ L +++eY+++Lq
  PCP001787.1 44 RSKHSVTEQRRRSKINERFQILRDLIPHS----DQKRDTASFLLEVIEYVQYLQ 93
                 899*************************9....8*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MRTATKGNQE EDEYDEEEFG SRKEGPSNSN SKDAKNNDKA SAIRSKHSVT EQRRRSKINE  60
RFQILRDLIP HSDQKRDTAS FLLEVIEYVQ YLQEKVHKYE GSYQGWSPEP TKLMPWRNSH  120
WRVQSFVGNP QAIKSDTAPV SPFPGKFDEN NISINPNMLG NSTSNPVETD PSRDVASKIV  180
DQQPEIVNKR IPLPMPLPNI TPPVRSGGVL AHPLQGQISD AQSTQCPTTS ASDALSQHEQ  240
LTVEGGTISI SSVYSQGLLN SLSQVLQSAG VDLSHASISV QIDLGNRANR GLSSGTPASK  300
DNENPHSSNQ MMAHFRDAGS GEDSDQAHKR LKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.12e-99bHLH family protein